1: Introduction | 2: Installation | 3: Preparing the input | 4: Estimating the number of mutational processes and their signatures | 5: Estimating exposures to known signatures. | 6: Results and plots | 7: Supervised approaches to exposure analysis | 8: Unsupervised approaches to exposure analysis | 9: Frequently Asked Questions | 10: References | Debug Info

Introduction | Install signeR | Running shiny app | Modules | signeR de novo | Load data | VCF, MAF or SNV Matrix | Opportunity matrix | de novo analysis | cosmic cosine | signeR fitting | SNV matrix | Previous signatures | Fitting analysis | Downstream analysis | Clustering | Covariate | TCGA Explorer | Filter dataset | Covariate analysis | SessionInfo